PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019197056.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

CPP

Protein Properties

Length: 493aa MW: 54033.4 Da PI: 8.6723

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019197056.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45.7	1.3e-14	138	176	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C++C+N+ e XP_019197056.1 138 KQKQCNCKNSRCLKLYCECFASGIYCDG-CNCQNCQNNIE 176 89************************.******976 PP
2	TCR	51.2	2.5e-16	222	260	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 k+++gCnCkks ClkkYCeCf+a+ Cs +CkC dCkN XP_019197056.1 222 KHNRGCNCKKSGCLKKYCECFQANILCSGNCKCADCKNF 260 5899**********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MEESDVTAFS KTEASELPLK KLGRQFDFTV RRKSSAIEIL SEHPQALLQS KLLALAKRQA 60 MMFATQSPPP PPSMAQVKTI LPSTTRLNSP RPTQAVARVF RTRPVQSLPP IMQQVVKTEP 120 PNSQYNSTMR QKNGTPKKQK QCNCKNSRCL KLYCECFASG IYCDGCNCQN CQNNIENEVN 180 RKIALSAILE RNPNAFRPKI TSSPQGLKNG VVEVGEDSPS GKHNRGCNCK KSGCLKKYCE 240 CFQANILCSG NCKCADCKNF DGSNGKSSLF HWAHTNLAAF IQAHAPINGA ISNSWFVPTP 300 PTKKRKNGEM PSGDNSTDKS NKFSQSQQDA SSGPLCATPY DFAIQSVPES SNCKYRSLLA 360 SIIQLQNVAE LCSLLVTLSK EAAKMLTDDF QNRRAVSSET RALMCDNSHD LVPAAEFATG 420 ISGCNARISL NTSSGDHFST LYAEQEKIIL TTFCSFLNEL VTYASIKETT FSPPSNEKSG 480 SWQLPTENGQ CPG

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MEESDVTAFS KTEASELPLK KLGRQFDFTV RRKSSAIEIL SEHPQALLQS KLLALAKRQA  60
MMFATQSPPP PPSMAQVKTI LPSTTRLNSP RPTQAVARVF RTRPVQSLPP IMQQVVKTEP  120
PNSQYNSTMR QKNGTPKKQK QCNCKNSRCL KLYCECFASG IYCDGCNCQN CQNNIENEVN  180
RKIALSAILE RNPNAFRPKI TSSPQGLKNG VVEVGEDSPS GKHNRGCNCK KSGCLKKYCE  240
CFQANILCSG NCKCADCKNF DGSNGKSSLF HWAHTNLAAF IQAHAPINGA ISNSWFVPTP  300
PTKKRKNGEM PSGDNSTDKS NKFSQSQQDA SSGPLCATPY DFAIQSVPES SNCKYRSLLA  360
SIIQLQNVAE LCSLLVTLSK EAAKMLTDDF QNRRAVSSET RALMCDNSHD LVPAAEFATG  420
ISGCNARISL NTSSGDHFST LYAEQEKIIL TTFCSFLNEL VTYASIKETT FSPPSNEKSG  480
SWQLPTENGQ CPG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20110.1	1e-86	CPP family protein