PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196967.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family HD-ZIP
Protein Properties Length: 760aa    MW: 83872.5 Da    PI: 6.5125
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196967.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.51.7e-2195150156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL  rqVk+WFqNrR++ k
  XP_019196967.1  95 RKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLHPRQVKFWFQNRRTQIK 150
                     7999************************************************9877 PP

2START213.38.5e-672744996206
                     HHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS...........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   6 aaqelvkkalaeepgWvkss....esengdevlqkfeeskv..........dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     a++el k+a++++p+W +s     e++n+de+++ f+ +k+          +s+ea+r++g+v+m++++lv++++d + qW+e+++    ka+t+
  XP_019196967.1 274 ALEELKKMASSAAPLWIRSFetgrEILNYDEYVKAFSVDKSapttalppkrSSIEASRDTGIVFMEPHRLVQSFMDAN-QWKEMFPcmisKAATV 367
                     678999*************99***************99999*************************************.**************** PP

                     EEECTT........EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE CS
           START  83 evissg........galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwve 168
                     +vis g        ga qlm+ae q+l+p+v  R+++fvRy++ql+++ w+ivdvSvd  +++  ++s+v+++++pSg++i+++sngh+kvtwve
  XP_019196967.1 368 DVISVGdgangnwnGAAQLMFAEVQMLTPVVGtREVYFVRYCKQLSGDEWAIVDVSVDKVEDNI-DASLVKCRKRPSGCIIHDNSNGHCKVTWVE 461
                     **************************************************************98.9***************************** PP

                     -EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 169 hvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     h +++++++h+l+r +v+sg a+ga +w+ tlq++ce+
  XP_019196967.1 462 HLECQKSTVHSLYRAIVNSGSAFGAHHWMVTLQQHCER 499
                     ************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 760 aa     Download sequence    
MGVVEMSNNP PDSFASPALS LSLAGIFRDA AAARAANADA EEGSAGGPRR EETVEISSEN  60
SGPARSRSDD DFDGDREHDD NYNDEDDDNA KKKKRKKYHR HTAEQIREME ALFKESPHPD  120
EKQRQQLSKQ LGLHPRQVKF WFQNRRTQIK AIQERHENSL LKSEIEKLRD QNKELRETIK  180
NNCCPNCGFA GSAAGKDPMV AAGGEQQLRI ENARLRAEVE KLRAAVGKYP AGTSPNNSSS  240
CSGGNEQESR SALDFYTGIF GLEKSRIMDV VNVALEELKK MASSAAPLWI RSFETGREIL  300
NYDEYVKAFS VDKSAPTTAL PPKRSSIEAS RDTGIVFMEP HRLVQSFMDA NQWKEMFPCM  360
ISKAATVDVI SVGDGANGNW NGAAQLMFAE VQMLTPVVGT REVYFVRYCK QLSGDEWAIV  420
DVSVDKVEDN IDASLVKCRK RPSGCIIHDN SNGHCKVTWV EHLECQKSTV HSLYRAIVNS  480
GSAFGAHHWM VTLQQHCERL VFYMATNVPT KDSTGVATLA GRKSILTLAQ RMCLAFFRAL  540
GASSYNTWNK IPTKTGDDIR VASRKNLSDP GEPLGVILSA VSSVWLPVSH HALFEFLRDE  600
THRHEWDIMS NRGPVESIAN LAKGQDRGNA VTILATKSKE NNMWLLQDTC TNVYESMVVY  660
APVDIGSMQA VMTGCDSSNT AVLASGFSIL PDGLDSRPLL ITSKPEEKST EGGSLLTIAF  720
QILTSNSPTA KLSMDSIDSL NNLVSCTLQK IKKCLQCEDG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19196KKKKRK
29197KKKKRKK
39397KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein