PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019196967.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 760aa MW: 83872.5 Da PI: 6.5125 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 67.5 | 1.7e-21 | 95 | 150 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL rqVk+WFqNrR++ k XP_019196967.1 95 RKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLHPRQVKFWFQNRRTQIK 150 7999************************************************9877 PP | |||||||
2 | START | 213.3 | 8.5e-67 | 274 | 499 | 6 | 206 |
HHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS...........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS START 6 aaqelvkkalaeepgWvkss....esengdevlqkfeeskv..........dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 a++el k+a++++p+W +s e++n+de+++ f+ +k+ +s+ea+r++g+v+m++++lv++++d + qW+e+++ ka+t+ XP_019196967.1 274 ALEELKKMASSAAPLWIRSFetgrEILNYDEYVKAFSVDKSapttalppkrSSIEASRDTGIVFMEPHRLVQSFMDAN-QWKEMFPcmisKAATV 367 678999*************99***************99999*************************************.**************** PP EEECTT........EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE CS START 83 evissg........galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwve 168 +vis g ga qlm+ae q+l+p+v R+++fvRy++ql+++ w+ivdvSvd +++ ++s+v+++++pSg++i+++sngh+kvtwve XP_019196967.1 368 DVISVGdgangnwnGAAQLMFAEVQMLTPVVGtREVYFVRYCKQLSGDEWAIVDVSVDKVEDNI-DASLVKCRKRPSGCIIHDNSNGHCKVTWVE 461 **************************************************************98.9***************************** PP -EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 169 hvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206 h +++++++h+l+r +v+sg a+ga +w+ tlq++ce+ XP_019196967.1 462 HLECQKSTVHSLYRAIVNSGSAFGAHHWMVTLQQHCER 499 ************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 760 aa Download sequence |
MGVVEMSNNP PDSFASPALS LSLAGIFRDA AAARAANADA EEGSAGGPRR EETVEISSEN 60 SGPARSRSDD DFDGDREHDD NYNDEDDDNA KKKKRKKYHR HTAEQIREME ALFKESPHPD 120 EKQRQQLSKQ LGLHPRQVKF WFQNRRTQIK AIQERHENSL LKSEIEKLRD QNKELRETIK 180 NNCCPNCGFA GSAAGKDPMV AAGGEQQLRI ENARLRAEVE KLRAAVGKYP AGTSPNNSSS 240 CSGGNEQESR SALDFYTGIF GLEKSRIMDV VNVALEELKK MASSAAPLWI RSFETGREIL 300 NYDEYVKAFS VDKSAPTTAL PPKRSSIEAS RDTGIVFMEP HRLVQSFMDA NQWKEMFPCM 360 ISKAATVDVI SVGDGANGNW NGAAQLMFAE VQMLTPVVGT REVYFVRYCK QLSGDEWAIV 420 DVSVDKVEDN IDASLVKCRK RPSGCIIHDN SNGHCKVTWV EHLECQKSTV HSLYRAIVNS 480 GSAFGAHHWM VTLQQHCERL VFYMATNVPT KDSTGVATLA GRKSILTLAQ RMCLAFFRAL 540 GASSYNTWNK IPTKTGDDIR VASRKNLSDP GEPLGVILSA VSSVWLPVSH HALFEFLRDE 600 THRHEWDIMS NRGPVESIAN LAKGQDRGNA VTILATKSKE NNMWLLQDTC TNVYESMVVY 660 APVDIGSMQA VMTGCDSSNT AVLASGFSIL PDGLDSRPLL ITSKPEEKST EGGSLLTIAF 720 QILTSNSPTA KLSMDSIDSL NNLVSCTLQK IKKCLQCEDG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 91 | 96 | KKKKRK |
2 | 91 | 97 | KKKKRKK |
3 | 93 | 97 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79840.1 | 0.0 | HD-ZIP family protein |