PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019196965.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 761aa MW: 83943.6 Da PI: 6.5125 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 67.5 | 1.7e-21 | 95 | 150 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL rqVk+WFqNrR++ k XP_019196965.1 95 RKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLHPRQVKFWFQNRRTQIK 150 7999************************************************9877 PP | |||||||
2 | START | 213.3 | 8.5e-67 | 274 | 499 | 6 | 206 |
HHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS...........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS START 6 aaqelvkkalaeepgWvkss....esengdevlqkfeeskv..........dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 a++el k+a++++p+W +s e++n+de+++ f+ +k+ +s+ea+r++g+v+m++++lv++++d + qW+e+++ ka+t+ XP_019196965.1 274 ALEELKKMASSAAPLWIRSFetgrEILNYDEYVKAFSVDKSapttalppkrSSIEASRDTGIVFMEPHRLVQSFMDAN-QWKEMFPcmisKAATV 367 678999*************99***************99999*************************************.**************** PP EEECTT........EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE CS START 83 evissg........galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwve 168 +vis g ga qlm+ae q+l+p+v R+++fvRy++ql+++ w+ivdvSvd +++ ++s+v+++++pSg++i+++sngh+kvtwve XP_019196965.1 368 DVISVGdgangnwnGAAQLMFAEVQMLTPVVGtREVYFVRYCKQLSGDEWAIVDVSVDKVEDNI-DASLVKCRKRPSGCIIHDNSNGHCKVTWVE 461 **************************************************************98.9***************************** PP -EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 169 hvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206 h +++++++h+l+r +v+sg a+ga +w+ tlq++ce+ XP_019196965.1 462 HLECQKSTVHSLYRAIVNSGSAFGAHHWMVTLQQHCER 499 ************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 761 aa Download sequence |
MGVVEMSNNP PDSFASPALS LSLAGIFRDA AAARAANADA EEGSAGGPRR EETVEISSEN 60 SGPARSRSDD DFDGDREHDD NYNDEDDDNA KKKKRKKYHR HTAEQIREME ALFKESPHPD 120 EKQRQQLSKQ LGLHPRQVKF WFQNRRTQIK AIQERHENSL LKSEIEKLRD QNKELRETIK 180 NNCCPNCGFA GSAAGKDPMV AAGGEQQLRI ENARLRAEVE KLRAAVGKYP AGTSPNNSSS 240 CSGGNEQESR SALDFYTGIF GLEKSRIMDV VNVALEELKK MASSAAPLWI RSFETGREIL 300 NYDEYVKAFS VDKSAPTTAL PPKRSSIEAS RDTGIVFMEP HRLVQSFMDA NQWKEMFPCM 360 ISKAATVDVI SVGDGANGNW NGAAQLMFAE VQMLTPVVGT REVYFVRYCK QLSGDEWAIV 420 DVSVDKVEDN IDASLVKCRK RPSGCIIHDN SNGHCKVTWV EHLECQKSTV HSLYRAIVNS 480 GSAFGAHHWM VTLQQHCERL VFYMATNVPT KDSTAGVATL AGRKSILTLA QRMCLAFFRA 540 LGASSYNTWN KIPTKTGDDI RVASRKNLSD PGEPLGVILS AVSSVWLPVS HHALFEFLRD 600 ETHRHEWDIM SNRGPVESIA NLAKGQDRGN AVTILATKSK ENNMWLLQDT CTNVYESMVV 660 YAPVDIGSMQ AVMTGCDSSN TAVLASGFSI LPDGLDSRPL LITSKPEEKS TEGGSLLTIA 720 FQILTSNSPT AKLSMDSIDS LNNLVSCTLQ KIKKCLQCED G |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 91 | 96 | KKKKRK |
2 | 91 | 97 | KKKKRKK |
3 | 93 | 97 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79840.1 | 0.0 | HD-ZIP family protein |