PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196950.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 396aa    MW: 42741.2 Da    PI: 6.1651
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.44e-062933311154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_019196950.1 293 VRKEKMGDRITALQQLISPF-----GKTDTASVLSEAIEYIKFL 331
                     5778999***********98.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MAEEFQLGSG NWWESSSSSS SRLNHRFESS SGSSSSSTAA ISSTQNDVSM ESSGFIGCWP  60
THLIVDSKPK SSLDSVSAAG GGGDAALLSH HGFHNIMGLG LSPQQIPCWN NNNIPSLFSN  120
ANASFQQDCS SSYDYDKQMN RLSLDQPQPT PPLSSLEGST ASSDLDRTAS AVLQPESSPM  180
NFSYDVSQNY GMKPGGGGGA VIGDITSPTW SKFPQFLRPR QPQFSNNTTF WNAAMNDDDA  240
QFSLFPVDEK PKNISAGQRD SSTATKTAGC TETSSKRPRD QNDTATPMPA FKVRKEKMGD  300
RITALQQLIS PFGKTDTASV LSEAIEYIKF LHDQVNVLST PYLKSGASMR HQLNFEKSKN  360
PETASGQDLR SRGLCLVPIS STMTFPLTPT FGGCFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.11e-51bHLH family protein