PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019196883.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 593aa MW: 64150.9 Da PI: 6.7295

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019196883.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.3	1.2e-31	243	300	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers d++++ei+Y+g+H+h+k XP_019196883.1 243 EDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSP-DGQITEIVYKGSHDHPK 300 7**************************************.*************85 PP
2	WRKY	104.8	4.5e-33	409	467	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agC+v+k+ver+++dpk+v++tYeg+Hnh+ XP_019196883.1 409 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCSVRKHVERASHDPKAVITTYEGKHNHD 467 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MEDSHSHSLY SNSHSQQHLA APRADDAAHA PDHVDDGSSD ASDAAVFSRN AAGPNGGAKY 60 KLMSPAKLPI SRSACITIPP GLSPTSFLES PVLLSNVKAE PSPTTGSFSK LQTMQGFGST 120 GGFSFPRSNI YIESKSNNFE FEFPVGSYST SESSSIGPKQ NEPLKQSQDQ CLPQSLAPSS 180 LLESSIIPTS KELRISAPVA VHTSSVSTAP IESDELNQRG QSNPGIQTSN GDQPAAGAER 240 SSEDGYNWRK YGQKLVKGSE FPRSYYKCTY PNCEVKKIFE RSPDGQITEI VYKGSHDHPK 300 PQPSRRFTPG SLTSIQEDKF EKESSFNVKE GKLNSNDFNG YPGLSPGRVD DDGHEGAASQ 360 LLVTNDDTDD DDPFSKRRKL DGCVDITAVV KPIREPRVVV QTVSEVDILD DGYRWRKYGQ 420 KVVRGNPNPR SYYKCTNAGC SVRKHVERAS HDPKAVITTY EGKHNHDVPT ARTSANHETG 480 ATPLSGVSRV RPEENDAISL DLGVGIGYGT EHRPNGQLHS LAPETLQGQV HVSSSGMMTV 540 QPPPMVCYGT IHGGINRFGS TRQNMVQAPG FDTLPLQPAN QCPQTLGRVL LGP

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MEDSHSHSLY SNSHSQQHLA APRADDAAHA PDHVDDGSSD ASDAAVFSRN AAGPNGGAKY  60
KLMSPAKLPI SRSACITIPP GLSPTSFLES PVLLSNVKAE PSPTTGSFSK LQTMQGFGST  120
GGFSFPRSNI YIESKSNNFE FEFPVGSYST SESSSIGPKQ NEPLKQSQDQ CLPQSLAPSS  180
LLESSIIPTS KELRISAPVA VHTSSVSTAP IESDELNQRG QSNPGIQTSN GDQPAAGAER  240
SSEDGYNWRK YGQKLVKGSE FPRSYYKCTY PNCEVKKIFE RSPDGQITEI VYKGSHDHPK  300
PQPSRRFTPG SLTSIQEDKF EKESSFNVKE GKLNSNDFNG YPGLSPGRVD DDGHEGAASQ  360
LLVTNDDTDD DDPFSKRRKL DGCVDITAVV KPIREPRVVV QTVSEVDILD DGYRWRKYGQ  420
KVVRGNPNPR SYYKCTNAGC SVRKHVERAS HDPKAVITTY EGKHNHDVPT ARTSANHETG  480
ATPLSGVSRV RPEENDAISL DLGVGIGYGT EHRPNGQLHS LAPETLQGQV HVSSSGMMTV  540
QPPPMVCYGT IHGGINRFGS TRQNMVQAPG FDTLPLQPAN QCPQTLGRVL LGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-156	WRKY family protein