PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019196599.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 220aa MW: 23938.3 Da PI: 4.4766 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.9 | 2.5e-18 | 26 | 76 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr + +g+Wv+eIr p++ r r++lg+f+++e+Aa+a +aa +l+g XP_019196599.1 26 CKYRGVRKRN-WGKWVSEIRLPNS---RERIWLGSFDSPEKAARAFDAALFCLRG 76 79*****887.**********933...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MVKPEKAIKN DNVSTSSPSS SSSSPCKYRG VRKRNWGKWV SEIRLPNSRE RIWLGSFDSP 60 EKAARAFDAA LFCLRGKNAN FNFPDNPPDI VDGNSMSLAQ IKVAAANFAN SEPPPRAAGA 120 MEQQVSDPST SLSSGAESPS PSVSDGAVHQ AEGEMTETAL DHGFLQRFSS LGGNANNAVT 180 DFGYFPGFDD FSNDYYVPPM PIPDTDYVEE TYDGSFLWNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 6e-47 | ERF family protein |