PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196585.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 363aa    MW: 40055.2 Da    PI: 4.9698
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196585.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.41e-19113162255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdps+     r++lg+f+taeeAa+a++  +++++g
  XP_019196585.1 113 QYRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTFDTAEEAARAYDIEARRIRG 162
                     69*******.**********965...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MCGGAIISDF KPPSRSSRRL TADLLWGRAD LSGGKKKSNS SGSHYSKPLR SEVVVLDDDF  60
EADFQDFKDH SYSQVDAKPF AFSASHRPGF SSGPDSDSSK DADNSSKRKR KNQYRGIRQR  120
PWGKWAAEIR DPSKGVRVWL GTFDTAEEAA RAYDIEARRI RGKKAKVNFP DDAPLTVNKN  180
TAKVNPQKAV PDFGYYDPSN FFEEKPLTKP NGYIDMCPVP GDMGSKSYLP SDAANLYFSS  240
EEGSNLLDYS DFGWADRSSR SPEISSVLSA ALEADEAQFA EEANPQKKLK SSSDNLLASN  300
GNTVEKLSEE LSAFEAQMKF FDIPYLEGNC GAPTFNAYAT QDGGNAMNLW CFDDIPSFTG  360
DVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.31e-51ERF family protein