PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019196112.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WOX

Protein Properties

Length: 271aa MW: 29276.8 Da PI: 6.5083

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019196112.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	49.8	5.8e-16	29	89	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++++eq+ +Le+ F++ +p +ee ++ k l ++ +++V++WFqNrR + ++ XP_019196112.1 29 RSRWNPKPEQILILESIFNSgMVNPPKEETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 89 89***************99***********************************997 PP
2	Wus_type_Homeobox	107.1	1.1e-34	28	91	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RW+P+peQi iLe++++sG+++P+kee+ ri++ Le++G ++d+NVfyWFQNr++R+r++q XP_019196112.1 28 VRSRWNPKPEQILILESIFNSGMVNPPKEETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 91 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MEDYQDSSSS TSSPNTTNTV TPERNESVRS RWNPKPEQIL ILESIFNSGM VNPPKEETVR 60 IRKLLEKFGS VGDANVFYWF QNRRSRSRRR QRQLQLQASL GPPPAAAHHP QQAAAGAAIS 120 SCVFPPSSAS YNSAVSSYFP NLLGSSSSSS SSPPCCGGVD DEMLCLSGGE TMMSMNSAGL 180 EPASSSITPS SLMSSHDASH LSYQPGLITV FINGVATEVP RGPIDIKAMF GTEDELLLYH 240 SSGIPIPINQ FGILLQTLRH GESYFLVSRT A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	2e-32	WOX family protein