PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195620.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Dof
Protein Properties Length: 275aa    MW: 29331.7 Da    PI: 8.6588
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1252.3e-392888262
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    kekal+cprC stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rkn++ss
  XP_019195620.1 28 KEKALNCPRCSSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNRRSS 88
                    6899*****************************************************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MDSSQWPQGI GVVKGGVVEA PKKPRPEKEK ALNCPRCSST NTKFCYYNNY SLSQPRYFCK  60
TCRRYWTEGG SLRNVPVGGG SRKNRRSSII SSSSSSSSKK LPDLAVTPSP SFPCQQNPKG  120
HDLNLAYPPP MTANNFSGGA GGGISEILNL NPNSAAAMEI LKNGFMGMPA VHPDHHHSNA  180
AAAMFLAPNL HDAKPNGGFN FSLDGFCNGY GNLPQQQPAG TARMFFPNLD DLKPMPTDHQ  240
FEQQNRGEGD DNDASGYWNG MLGGGGAGGG GGTSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.22e-33Dof family protein