PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195610.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 303aa    MW: 34144.8 Da    PI: 5.4581
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.8e-09122170255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r  h  +Er+RR+ +   f  L +++P +     +K++K ++L  +++Y+k+ q
  XP_019195610.1 122 RYDHILAERKRRELLSRQFLALSTIVPGL-----RKMDKTSVLGDTIKYLKQIQ 170
                     567999**********************9.....8*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MMNLSQACFS GMGTDDLSFL DQFQILQSIE QEFAGVLGED VLCSSSPEEG SPPTTCHLGE  60
DDRPLKQLKI HHHPNIDDVN LPELRQELLT SNAIAEQETE PADTTTIKPK KSGRRGRPPT  120
HRYDHILAER KRRELLSRQF LALSTIVPGL RKMDKTSVLG DTIKYLKQIQ ERVKTLEEES  180
SKRTMESVVF VKKSQVSFDD DDEMSSGEKG NSDEQSLPEI ETRLCDNHIL LRIYCDRQKG  240
IIGKIFSEVE KLNLAVVNSS VARFGSLALD ITIIVEMEKE FDLPMKHIAK ILRSAIQHAA  300
QTS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129134ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-49bHLH family protein