PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195609.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 313aa    MW: 35359 Da    PI: 6.2955
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195609.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH277.8e-09132177555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     h ++Er+RR+ +   f  L +++P +     +K++K ++L  +++Y+k+ q
  XP_019195609.1 132 HIMAERKRRELLSRQFLALSTIVPGL-----RKMDKTSVLGDTIKYLKQIQ 177
                     899**********************9.....8*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MMNLSQACFS GMGMDDLSFL DQFQILQSIE QELAAVLGED VLCSSSPEEG SPPPPPPPAA  60
TTSHLGEDDR PSKQLKNHHH PNLDVNPTEQ RQELVTSNAS AEQETVPPAE TTTKKGGKSG  120
RRGRPPTNTY DHIMAERKRR ELLSRQFLAL STIVPGLRKM DKTSVLGDTI KYLKQIQERV  180
RLLEEESSKR SMESIMFVNK YQESFDDNDD MSSGKNEKSE EQPRLEIETR LCDNHILLRI  240
HCERHKGVIG QIFSEVEKLN LAVVNSSVAR FGSLTYDITI IVEMLKEFDL PVKHIAKNLR  300
YAIQNASKHH ELK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136141ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.17e-47bHLH family protein