PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019195539.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 297aa MW: 31810.5 Da PI: 9.3848

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019195539.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.5	3.4e-39	58	116	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++ XP_019195539.1 58 SENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKST 116 57899***************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MNSQRQDSCY RDQKMIQELL AAGNGGLLGG GESNNAPKLS ITDTSSGPLV SSSPTSRSEN 60 LRCPRCDSSN TKFCYYNNYN LTQPRHFCKT CRRYWTKGGA LRNVPIGGGC RKNKSTIVSA 120 SIGKSSAAAA TSTKWKSTFL GGLEPEIPSS KTFLFGPPQN TNHHPFLSLL RSSQNPNPST 180 VMNSGVEAPA LWRNSQHRGQ LQNGFILAAG DAQTVGMQEL LYQRLIKSSS SSSSATNNYN 240 LNCYEHPLAL LGNAASSSVL SPAILESAPV SAAGEFGYWN PSLSTWSDLP TTGGAYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	9e-33	Dof family protein