PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019195440.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 642aa MW: 68670 Da PI: 6.9477

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019195440.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.9	9.5e-10	455	492	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + XP_019195440.1 455 FEHflHPYPSDADKHMLARQTGLSRSQVSNWFINARVR 492 554459******************************88 PP
2	BELL	114.2	6.8e-37	316	386	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r e+q++k+kLls+l+eVd+rY++y+eq+q+v++sF+ v+g g+a+pYt A+ka+SrhFrcLkda+a q+ XP_019195440.1 316 RVEHQRRKVKLLSMLDEVDRRYNRYCEQMQMVVNSFDLVMGFGAAAPYTVQAQKAMSRHFRCLKDAVAAQL 386 789*****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 642 aa Download sequence
MSQDYHHHPG LFSFSNGFER SPAEILQQIR RDKVPPAPPQ QVEEEDEHPV GLAGSNETSG 60 MLSEMFNFQH GTARELLESQ IYHHHHGQQS QPQMAAAMQL FGMNPSPSPS PSSNHSAAAA 120 STFHVSSVPN PSPTSTLQGF HSHAPTGGHF SQFAWGDGGT AAAAAGEGQG LSLSLSSAKA 180 GEEFRISGDA AGMLFFSQGM ASASSEYPCK NNLNLNGGGG GGGGVMDHHH IHVGFGSSIG 240 VINGLRHSKY AKPAQELLDE FCSVVVSAHH QFNNKNKSLN PNSNPTSSDA VDGGDAPNNN 300 SSSSSKPTPP LSTADRVEHQ RRKVKLLSML DEVDRRYNRY CEQMQMVVNS FDLVMGFGAA 360 APYTVQAQKA MSRHFRCLKD AVAAQLKHSC EVLGEKDGGA SSGLTKGETP RLKMLEQSLR 420 QQRAFHQMGM MEPEAWRPQR GLPERSVNAL RAWLFEHFLH PYPSDADKHM LARQTGLSRS 480 QVSNWFINAR VRLWKPMVEE MYQQEVKVGD SENMDSPSSG DDTVAVSNSP TTTTTAPPPP 540 SAAAAVTATA ADTVAAAGKR SEINAANESD PSLLAINTQC FSRNQASTCH RRGTADSGKA 600 DVGSALIRFG TTNAGGGGGG NVSLTLGLRH AGNLPDQNHF FG

Sequence ? help Back to Top

Protein Sequence Length: 642 aa Download sequence

MSQDYHHHPG LFSFSNGFER SPAEILQQIR RDKVPPAPPQ QVEEEDEHPV GLAGSNETSG  60
MLSEMFNFQH GTARELLESQ IYHHHHGQQS QPQMAAAMQL FGMNPSPSPS PSSNHSAAAA  120
STFHVSSVPN PSPTSTLQGF HSHAPTGGHF SQFAWGDGGT AAAAAGEGQG LSLSLSSAKA  180
GEEFRISGDA AGMLFFSQGM ASASSEYPCK NNLNLNGGGG GGGGVMDHHH IHVGFGSSIG  240
VINGLRHSKY AKPAQELLDE FCSVVVSAHH QFNNKNKSLN PNSNPTSSDA VDGGDAPNNN  300
SSSSSKPTPP LSTADRVEHQ RRKVKLLSML DEVDRRYNRY CEQMQMVVNS FDLVMGFGAA  360
APYTVQAQKA MSRHFRCLKD AVAAQLKHSC EVLGEKDGGA SSGLTKGETP RLKMLEQSLR  420
QQRAFHQMGM MEPEAWRPQR GLPERSVNAL RAWLFEHFLH PYPSDADKHM LARQTGLSRS  480
QVSNWFINAR VRLWKPMVEE MYQQEVKVGD SENMDSPSSG DDTVAVSNSP TTTTTAPPPP  540
SAAAAVTATA ADTVAAAGKR SEINAANESD PSLLAINTQC FSRNQASTCH RRGTADSGKA  600
DVGSALIRFG TTNAGGGGGG NVSLTLGLRH AGNLPDQNHF FG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23760.2	1e-128	TALE family protein