PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195131.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 359aa    MW: 39361.9 Da    PI: 5.5806
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195131.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.14.4e-29127188159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs+edp++++itY+g+H+++
  XP_019195131.1 127 LDDGYSWRKYGQKDILGARYPRGYYRCTYRhaqGCLATKQVQRSDEDPTIFDITYRGRHTCN 188
                     59**************************998999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MENFAGDRDL QSLITELANG REAATQLQMI LNAPSPFSSE TRELLVHNVL ASYDKALGML  60
NYSPESTQVQ PAAAAGPAFG MESPSSFTGS PHSEDSDREH DGSRKRNAPR WTQKVQVCPG  120
SGLEGHLDDG YSWRKYGQKD ILGARYPRGY YRCTYRHAQG CLATKQVQRS DEDPTIFDIT  180
YRGRHTCNQG GGNPNPPQPP QIPPQNQEPT ESQRGISPFS QQGQPSETLL SFCRQLRVET  240
SNLDNTHQEN QQLTYLYSFP SSSDQSYSFR PPSVLDGGNF SWSISPSFGS PASTSESSDF  300
GRRPRQTTTE AQPTSTTNTG IIPAVSAANS PAVDPGFAFG TLGFDSNFTF DSHGFFPNH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-52WRKY family protein