PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195010.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 692aa    MW: 78700.7 Da    PI: 9.8963
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.84.5e-14401221299
                     HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     ++ rl++p kfa++hg +   +k  +le ++g++ ++++ +  ++gr++l+kGW+eF k   ++e  f+vF++dg+s f  +v +f++
  XP_019195010.1  40 ELTRLRFPLKFARRHGRN--LPKVARLEVPTGQVSKIQV-VHDSQGRIWLAKGWEEFTKNYSIREDYFLVFRYDGESHF--HVLIFDN 122
                     56799**********977..8899********9999999.4566678****************************9999..****997 PP
2B349.57.5e-16228317395
                     EE-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   3 kvltpsdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     +v+ ps+v++  ++l++p  fa+eh + + ++ +l+l +  grsW  k+  +++++   +  GWk Fv +n+Lk+gD+++++ +++++ + ++ 
  XP_019195010.1 228 SVMYPSYVSSGySILTIPLAFAKEHFLGQSSNNDLVLVS-GGRSWPAKC--TRSGNNARIF-GWKAFVVDNKLKVGDVCILEIMKSKKLSVNII 317
                     578999999988999**********55556777898877.9********..6666666555.********************887666655544 PP
3B347.24e-154114911499
                     T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                      rl+lp kfa++hg +   +k   le ++g++ ++++ +  ++gr++l kGW+eF k   +++g f+vF++dg+s f  +v +f+k
  XP_019195010.1 411 TRLRLPLKFARRHGRN--LPKVACLEVPTGQVSKIQV-VHDSQGRIWLDKGWEEFTKNYSIRDGHFLVFRYDGESHF--HVLIFDK 491
                     689**********977..8899********9999999.4566678****************************9999..*****98 PP
4B346.56.4e-15596683595
                     -..-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   5 ltpsdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     + p +v+++ +rl +p  fa++h + + ++ +l+l +  grsW  k+   ++ +   +  GWk Fv +n+Lk+gD+++++ +++++ + ++ 
  XP_019195010.1 596 MYPYYVSSKgSRLNIPLAFAKKHFLGQSSNNDLVLVS-GGRSWPAKC--ARSVNNARIF-GWKAFVVDNKLKVGDVCILEIMKSKKLTVNII 683
                     666666666589***********55556777898877.9********..5555554444.9*******************887666655554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 692 aa     Download sequence    
MHYSGKIMET KPFRRNGERP SRPNSSENRP QFYKIILAHE LTRLRFPLKF ARRHGRNLPK  60
VARLEVPTGQ VSKIQVVHDS QGRIWLAKGW EEFTKNYSIR EDYFLVFRYD GESHFHVLIF  120
DNNTASEIEY PQIIVSHGGV ESLEDLSQKC GPNKRKRQED QTGSFCNRFN HVRVKVENSA  180
DDDEGSPPLM TPKISSGEKQ RLVKTKTEMG SAYERAKAFK SKNPFHISVM YPSYVSSGYS  240
ILTIPLAFAK EHFLGQSSNN DLVLVSGGRS WPAKCTRSGN NARIFGWKAF VVDNKLKVGD  300
VCILEIMKSK KLSVNIIVFP ADEIDETFQF RHHYDDLKRK FDDQRPVKPS TAEGDQLVAF  360
SIEDDQNCLH SPGKIMAPKP FRRNGGGLSR RCSSEIGPQI FNFIIFSHEP TRLRLPLKFA  420
RRHGRNLPKV ACLEVPTGQV SKIQVVHDSQ GRIWLDKGWE EFTKNYSIRD GHFLVFRYDG  480
ESHFHVLIFD KTASEIEYPE IVSHGGVESL EDLSQKCGPN KRKRQEDQTG SFCNRFNHVR  540
VQVENSADDD EGSPPLMTPK ISTGEKKSLV KTTEMGSAYE RAKAFKSKNP FHISVMYPYY  600
VSSKGSRLNI PLAFAKKHFL GQSSNNDLVL VSGGRSWPAK CARSVNNARI FGWKAFVVDN  660
KLKVGDVCIL EIMKSKKLTV NIIVFPADAI DD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-28B3 family protein