PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019194987.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 298aa MW: 33483.8 Da PI: 6.5977 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.2 | 1.6e-17 | 43 | 90 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv ++++ G g+W++ ++ g+ R++k+c++rw +yl XP_019194987.1 43 KGAWTAEEDKILVAYITKNGHGNWRSLPKLAGLLRCGKSCRLRWTNYL 90 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.2 | 1.2e-15 | 96 | 141 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++ eE + ++++++ lG++ W+ Ia++++ gRt++++k++w+++l XP_019194987.1 96 RGQFSSEEVDAIIQLHTVLGNK-WSVIASHLP-GRTDNDIKNFWNSHL 141 899*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MKNTTSLIFF LLSCYQGEEW KEGRTEEAIM GRTPCCNKEG LRKGAWTAEE DKILVAYITK 60 NGHGNWRSLP KLAGLLRCGK SCRLRWTNYL RPGIKRGQFS SEEVDAIIQL HTVLGNKWSV 120 IASHLPGRTD NDIKNFWNSH LRKQRSDPNH QNHPIPHPHG NIDEKVQWES VSVAPSLLDL 180 PPASKMDRDP FLRLWNSEVG EAFCGFKKPF GVPCQSPVSS SSKFESSSGI TLHSQPAASK 240 LLSSADTVEE EEEEDTKSYE LIDPSETTLK ILLDFPPVVN DMGFFQGPGD NLSIYLQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 2e-68 | MYB family protein |