PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019194986.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 213aa MW: 24201.8 Da PI: 5.4154 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 52.6 | 8.3e-17 | 44 | 93 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e+E+rRR++iN++f+ Lr l+P+ + K +Ka+ L ++++YI+sLq XP_019194986.1 44 RSKHSEAEQRRRSKINERFQILRNLIPEK----DNKRDKASFLLEVIQYIQSLQ 93 889*************************8....799*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MLRAAMNHSD EDDDMEFSSR SVDGFSQKVK VEGRSGDQKA NVVRSKHSEA EQRRRSKINE 60 RFQILRNLIP EKDNKRDKAS FLLEVIQYIQ SLQGRIQMYE GGCQDWSQEP SELMPWRSSS 120 GAVGHSELIR NGSAHEDNGV LDQTILANAH DSTESDPSAE VLYKTMDDLQ RLTNEATSFG 180 MQMQPSFFEV RMVKKSQKLE AEKLESQTSS PRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 2e-35 | bHLH family protein |