PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019194797.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

FAR1

Protein Properties

Length: 391aa MW: 45321.4 Da PI: 9.2666

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019194797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.7	1.2e-20	35	127	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA vGF+vr+s +k+ + g++ ++ +vCs+eg+++ + +e+ +r+r+++r+gC a++k + +g +evt++e+ H+H l+ XP_019194797.1 35 EFYEKYAALVGFDVRRSGDRKN-KVGKVLHKYLVCSREGFKQVAYLEkretSETVKRRRPSNRVGCGAHIKFNTIGNGGYEVTSFEERHTHRLC 127 6***************9999.5666**********96554444457888999********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MEISPGNTTY WVPKYDAKMK PTVGQQFKRL EDGIEFYEKY AALVGFDVRR SGDRKNKVGK 60 VLHKYLVCSR EGFKQVAYLE KRETSETVKR RRPSNRVGCG AHIKFNTIGN GGYEVTSFEE 120 RHTHRLCEEQ SKPFMKVNRK LDMGHKDFIE KCGKVNIGAS KSFNLYGEMV GGVEHVGATS 180 TDFKNHRRKI LAYMKERDAQ ELVAKCQERK EYWPDYYFEY AVDDQQQLSR IFWADEHGRK 240 SFAHFGDAMA FDATYKTNRY SLVFVPFTGV DNHKKSTTFA TGLIAKEDVE SYTWLLHHFK 300 RAMGGEPICT TTDQDPAMKI AIANVFPTTR HRYCMWHIMT KVSDKVGANL AKNDDFRRRL 360 NDIVWKNNST AEEFENDCVD FGYLHTSPML K

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MEISPGNTTY WVPKYDAKMK PTVGQQFKRL EDGIEFYEKY AALVGFDVRR SGDRKNKVGK  60
VLHKYLVCSR EGFKQVAYLE KRETSETVKR RRPSNRVGCG AHIKFNTIGN GGYEVTSFEE  120
RHTHRLCEEQ SKPFMKVNRK LDMGHKDFIE KCGKVNIGAS KSFNLYGEMV GGVEHVGATS  180
TDFKNHRRKI LAYMKERDAQ ELVAKCQERK EYWPDYYFEY AVDDQQQLSR IFWADEHGRK  240
SFAHFGDAMA FDATYKTNRY SLVFVPFTGV DNHKKSTTFA TGLIAKEDVE SYTWLLHHFK  300
RAMGGEPICT TTDQDPAMKI AIANVFPTTR HRYCMWHIMT KVSDKVGANL AKNDDFRRRL  360
NDIVWKNNST AEEFENDCVD FGYLHTSPML K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-56	FAR1 family protein