PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019194387.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 213aa MW: 22799.8 Da PI: 9.4143 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.1 | 8e-17 | 24 | 73 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr + +g+++AeIrdp + ++r +lg+f +aeeAa+a++aa++kl+g XP_019194387.1 24 RFRGVRKRA-WGKFAAEIRDPLK---KTRLWLGTFLSAEEAARAYDAAARKLKG 73 69****887.**********743...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MARGRAAAAA AGGAIGSGEL KEVRFRGVRK RAWGKFAAEI RDPLKKTRLW LGTFLSAEEA 60 ARAYDAAARK LKGPKAKTNF PPPATSQLPP YNQTSIPKNP FIGSLMHGQD PHTISQRPRP 120 ASSSMSSTVE SFSGPRPPPP PQTAATPNRR HPRSPPIAPD DCHSDCDSSS SVVDDGDCEN 180 IASSSFRKPL CFDLNLPPAM DDVCDLHSTA LCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 5e-23 | ERF family protein |