PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019194097.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 613aa MW: 66415.5 Da PI: 6.4699

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019194097.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.2	5.3e-31	258	315	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dD+ynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers d+k++ei+Y+g+H+h+k XP_019194097.1 258 DDEYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSP-DGKITEIVYKGSHDHPK 315 8**************************************.*************85 PP
2	WRKY	106.7	1.2e-33	430	488	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_019194097.1 430 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 488 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MLFTASPPFT LSPESSMEDS QSHSHSQSHA QHHSGEDLDD LQSSRVIHAG DGSSDAADAV 60 FSRSVAGSNC GARYKLMSPA KLPIARSAGI TIPPGLSPTS FLESPVLLSN IKAEPSPTTG 120 SFSNLHLMQG SGGSAAFSFP DSRAFSERKS SNFEFRFPIG SSSTSASTSI EHMTSAGLNQ 180 QQSETQRQVQ NQFVSQSLVP SSLVESSIPT SNGLNLSSAV ALHTSSVGTD AIESDGLNQR 240 GKAVNADQSS VTAERSSDDE YNWRKYGQKL VKGSEFPRSY YKCTYPNCEV KKIFERSPDG 300 KITEIVYKGS HDHPKPQPSR RFTPGAMMPI QEDKFEKESF FNGQEDKFNS IAQTGRPEPS 360 GIPILSPQRV DDDSHEGATL LLQGTNDDTD EDDPFSKRRK MDGCVDITPV VKPIREPRVV 420 VQTVSEVDIL DDGYRWRKYG QKVVRGNPNP RSYYKCTNAG CPVRKHVERA SHDPKAVITT 480 YEGKHNHDLP AARTSSHEMA STAPESGISR VRPEESDVIS LDLGVGIGYG TENRTNDQLH 540 SLAPETVPTQ VLASGGGMMA VQAPAIARYG IVNGGINRFG SRENHVQAPG FETLPLQSSN 600 QCPQTLGRIL MGP

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MLFTASPPFT LSPESSMEDS QSHSHSQSHA QHHSGEDLDD LQSSRVIHAG DGSSDAADAV  60
FSRSVAGSNC GARYKLMSPA KLPIARSAGI TIPPGLSPTS FLESPVLLSN IKAEPSPTTG  120
SFSNLHLMQG SGGSAAFSFP DSRAFSERKS SNFEFRFPIG SSSTSASTSI EHMTSAGLNQ  180
QQSETQRQVQ NQFVSQSLVP SSLVESSIPT SNGLNLSSAV ALHTSSVGTD AIESDGLNQR  240
GKAVNADQSS VTAERSSDDE YNWRKYGQKL VKGSEFPRSY YKCTYPNCEV KKIFERSPDG  300
KITEIVYKGS HDHPKPQPSR RFTPGAMMPI QEDKFEKESF FNGQEDKFNS IAQTGRPEPS  360
GIPILSPQRV DDDSHEGATL LLQGTNDDTD EDDPFSKRRK MDGCVDITPV VKPIREPRVV  420
VQTVSEVDIL DDGYRWRKYG QKVVRGNPNP RSYYKCTNAG CPVRKHVERA SHDPKAVITT  480
YEGKHNHDLP AARTSSHEMA STAPESGISR VRPEESDVIS LDLGVGIGYG TENRTNDQLH  540
SLAPETVPTQ VLASGGGMMA VQAPAIARYG IVNGGINRFG SRENHVQAPG FETLPLQSSN  600
QCPQTLGRIL MGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-160	WRKY family protein