PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019193989.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 210aa MW: 23290.5 Da PI: 4.1797 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.6 | 1.5e-18 | 21 | 72 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++y+GVr +k +g+Wv+e+r p++ r r++lg+f+++e+Aa+a +aa +l+ge XP_019193989.1 21 CKYRGVRKRK-WGKWVSEVRLPNS---RERIWLGSFDSPEKAARAFDAALFCLRGE 72 79*****999.*******999833...5**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MVKPKRQTAE IKNEPDSSSS CKYRGVRKRK WGKWVSEVRL PNSRERIWLG SFDSPEKAAR 60 AFDAALFCLR GETANFNFPD NPPDIVNGRS LTREEIQIAA VRFANSAAPI ANSGQPGNSD 120 SSSLLNADAP SPSDGSGSDQ MCSEMTETSL DSDFLDLCSY IGMEDNVANY GIFPGFDDFS 180 GEYYYVSPDI DDFAENYDGF SSQDSFLWNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 6e-60 | ERF family protein |