PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019193833.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Dof
Protein Properties Length: 227aa    MW: 24434 Da    PI: 8.1928
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019193833.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof129.21.2e-401676262
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    ++++lkcprCds+ntkfCyynny+lsqPr+fCk+CrryWtkGGalrn+PvGgg+rkn k+s
  XP_019193833.1 16 EQEHLKCPRCDSMNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRS 76
                    57899****************************************************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MQDPSIYTQI KPQFPEQEHL KCPRCDSMNT KFCYYNNYNL SQPRHFCKNC RRYWTKGGAL  60
RNIPVGGGSR KNAKRSSPSS SSSSKRSSAA AAAESSPPPQ QLPLPPPREA VQLPKSEAYG  120
MADLPPFNMN ASFTSLLTAT SGGQFGNFLD GSDLQLGEFP GNPTQNPAPG SGPNGAARMG  180
MGFQNVNNTE GFLGGVQSDG GDSPNGWTGV NNDWPDLAMY TPDSNFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.15e-39Dof family protein