PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019193556.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 367aa    MW: 40760.7 Da    PI: 6.9832
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019193556.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.55.7e-33212269259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s+fprsYYrCts++C+vkk+vers edp+vv++tYeg+Hnh+
  XP_019193556.1 212 EDGYRWRKYGQKAVKNSPFPRSYYRCTSQKCTVKKRVERSYEDPTVVVTTYEGQHNHH 269
                     8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MSDNPFYYHN HMGSGRINTF PFFGDDHADH NPSSIYASSD HHPPSAPTQN LLHQEFLPSP  60
FMSFTESLQG SMDYHSHSNA FGMSCSSSEV VCTPADHHHQ QHHQQQQHHQ ESSRKSSVSA  120
GEAAAGSSAE NIPFVAANSS VSSSSSEAAG GDNGEEDSSK SKKDLILPKG CEDGDDDKST  180
KINKGAAKKK GEKKQKEPRF AFMTKSEIDN LEDGYRWRKY GQKAVKNSPF PRSYYRCTSQ  240
KCTVKKRVER SYEDPTVVVT TYEGQHNHHC PATLRGNAVA LLSPASFLSP SPAALMPTFH  300
QDLLLNPMLS ASTNFQTSMY GSYHQHNHHL GLNPHHYDHQ MTQSAVDQYT LFQDMLVSSL  360
GHKQEHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.13e-45WRKY family protein