PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019193437.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

HSF

Protein Properties

Length: 355aa MW: 40178.6 Da PI: 6.3826

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019193437.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.2	1.5e-34	14	104	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+ye+++d++++ ++sws+ g+sfvv+++ efa+++LpkyFkh+nf+SF+RQLn+YgF+k++ e+ weF++++F +g+++ll++ XP_019193437.1 14 FLAKTYELVDDRANSAVVSWSRGGRSFVVWNPPEFARDLLPKYFKHNNFSSFIRQLNTYGFRKIDAEQ---------WEFANDEFIRGQTHLLKN 99 9*************************************************************9998.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_019193437.1 100 IHRRK 104 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MDGTQGGSAS PAPFLAKTYE LVDDRANSAV VSWSRGGRSF VVWNPPEFAR DLLPKYFKHN 60 NFSSFIRQLN TYGFRKIDAE QWEFANDEFI RGQTHLLKNI HRRKPIHSHS AQPNSGVPLS 120 EPERREFEEE IERLKQENSS LRVELDRREQ ENRECRFEFQ SLDSRLQSID ERQRQVLALV 180 AQLSLKPDLL HHLEVHNKKR KPSVSNGHLE LVNNLDSSIT VCQKILNGIS NGEEAYGNFE 240 TLPQAPSGDS RFSSPSTQTD TPEISSLHTK HPGADGNAKA AWNCAAVDVD RLKDRLEGRS 300 STAAVPVVGG NDVFWQQFLT EEVESERREI GIRNGRECMI VFAEQMGHFT PATGN

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MDGTQGGSAS PAPFLAKTYE LVDDRANSAV VSWSRGGRSF VVWNPPEFAR DLLPKYFKHN  60
NFSSFIRQLN TYGFRKIDAE QWEFANDEFI RGQTHLLKNI HRRKPIHSHS AQPNSGVPLS  120
EPERREFEEE IERLKQENSS LRVELDRREQ ENRECRFEFQ SLDSRLQSID ERQRQVLALV  180
AQLSLKPDLL HHLEVHNKKR KPSVSNGHLE LVNNLDSSIT VCQKILNGIS NGEEAYGNFE  240
TLPQAPSGDS RFSSPSTQTD TPEISSLHTK HPGADGNAKA AWNCAAVDVD RLKDRLEGRS  300
STAAVPVVGG NDVFWQQFLT EEVESERREI GIRNGRECMI VFAEQMGHFT PATGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	2e-66	HSF family protein