PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019193206.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | B3 | ||||||||
Protein Properties | Length: 590aa MW: 66507.7 Da PI: 4.6137 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 66.7 | 3.5e-21 | 132 | 233 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrse 89 f kvlt+sd+ ++ l++p++ a ++ ++++s++l+ +d +g W +++ +r+++ r +ltkGWk Fvk+++L +gD++vF + ++ XP_019193206.1 132 FSKVLTTSDTRSNWGLCIPRRDAINCfpaldTTQEKSSQMLIARDIHGSDWCFQHVFRGHPPRhLLLTKGWKAFVKSKELVAGDSFVFI--RGEN 224 88*********************999***99666678999*****************9999887999**********************..4499 PP E..EEEEE- CS B3 90 felvvkvfr 98 ++++v+v+r XP_019193206.1 225 GQMHVGVRR 233 999****98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 590 aa Download sequence |
MMDGQVGSSQ HQQLVELHCF DEAADYLYEE LWKACADPLM CVPTCGQRVF YFPGVHMDQL 60 DNSTNPEVID QQQISNLPPK VLCRVVNVQL LAKQETDEAY AQITLIPQPF ETGVNTVDPC 120 LHESPRSQFH SFSKVLTTSD TRSNWGLCIP RRDAINCFPA LDTTQEKSSQ MLIARDIHGS 180 DWCFQHVFRG HPPRHLLLTK GWKAFVKSKE LVAGDSFVFI RGENGQMHVG VRRLVYQQSC 240 VGLSRTSRQT KQVLGAVISQ AIATQTLFVV NYEARTSQCI ISLNKHLQSV ASGINLSVYY 300 EGEGYQHRRS EGNDEQMEEV DGTIYPLPQP TTISSEVDWE GLYDILESPD PLELDHEGGT 360 GENDERFNNL GNQDFEEWEE EQGQDPSPIL QHHGEESGMG DIPMAIQEGS LQAMDISSIP 420 SQIPYGGPGR GDEKIPWGGY LVAQRCIPTL NRVISRYPDS LLGFKPWSNA VKPTFLEVLA 480 ELVYLLERFT VESLGRSRDE FNTAKQFLWD LKNSGINVNW VETRLVQIDE ALEKQSLMQQ 540 QKELMLKYEE ARSALGKVEE DLGSVNMQLE ELSSHNHHPA TNKPILEGLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46530.1 | 2e-90 | ARF family protein |