PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019193152.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | FAR1 | ||||||||
Protein Properties | Length: 606aa MW: 69452.5 Da PI: 5.9541 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 85.5 | 8e-27 | 81 | 178 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........tekerr....traetrtgCkaklkvkkekdgkwevtklel 83 fY+eYA+++GF++ +++s++sk ++e+++++f Cs++g+++ ++k+ + +r+ ++t+Cka+++vk+++dg+w ++++e+ XP_019193152.1 81 FYQEYARSMGFQTAIQNSRRSKSSREFIDAKFACSRYGTKRGNDKSanrprssqdP----EngggRRVCEKTDCKASMHVKRRSDGRWIIHRFEK 171 9****************************************999996666654443....145559***************************** PP FAR1 84 eHnHela 90 eHnHel+ XP_019193152.1 172 EHNHELS 178 *****96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 606 aa Download sequence |
MDKEDKKTNG VVNLVNNEER PDHGADELGG DLVDFEENIN GEDGGDLYSP DQSDLGEFKD 60 DVNLEPLDGM EFESHGEALL FYQEYARSMG FQTAIQNSRR SKSSREFIDA KFACSRYGTK 120 RGNDKSANRP RSSQDPENGG GRRVCEKTDC KASMHVKRRS DGRWIIHRFE KEHNHELSLP 180 QAVTEQTKRM YAAMARQLAE FKNVVGTKSD SKSSFERAQN LAMDAGEANI LLEFFIQMQS 240 MNSNFFYAVD VSEDHRLKNF LWVDAKSRHD YARFSDVVSF DATYVRNKYK IPLALFIGVN 300 RNYQFVLLGT ALLSDESSAT LSWVMRTWLR AMGGRAPKAI VTDHEHVMTS VISEIFPSSL 360 HFFCLGKVSE SLKNVVMKQN EEEFMVKFEE CIFGPWTDEE FEERWQNLVN TFELRENELL 420 WSLYEERRKW VPTLMRSNNA AFLGESVNSF FDKYVNKETT LQEFVKQYGV ILQDRYKEEA 480 KADSDTTRYP PLAASGEKKC RVQRYNDLCQ RAMRLSEEGS LSQERYTSAL HALHEAYGNC 540 VNLESSNKIN PVGTLTSSTP GDLFVEGDNQ TSKTNKKRSS PTKKRKEEPK VMRSSSQLND 600 EAPRHA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22170.2 | 0.0 | FAR1 family protein |