PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019192930.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family HB-other
Protein Properties Length: 272aa    MW: 31660.6 Da    PI: 4.7617
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019192930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox18.53.5e-061874751
                    --HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHH CS
        Homeobox  7 ftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNr 51
                    ft  ++ e+e  F++  ++++++e  eeLA+k            +  +qVk+WF+N+
  XP_019192930.1 18 FTLAEIMEMEITFKEkgEKTLDQEFCEELAAKFssspyrsgktVIAWEQVKTWFHNK 74
                    88899*********778*************************99************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MEYLMEMDTQ EEDDFPEFTL AEIMEMEITF KEKGEKTLDQ EFCEELAAKF SSSPYRSGKT  60
VIAWEQVKTW FHNKQNGLAA KDTLLSLLNG TDVTPRPVGR PKKIIPKELN PSIRKIASQY  120
ASEKYQKPIG ERAAQLSELA FEALSSKDFA WYDVATFLNY RVTYSGDLEV RVRFAGFRND  180
QDEWVSVRRG LRERSIPLDH SECDKVEVGD LVLCFRENDD HALYCDAHIA EIERREHDIA  240
GCRCIFVVRY DYDNTEDKVE INKICRRPTR QD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.14e-60HB-other family protein