PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019192910.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 400aa MW: 44449.8 Da PI: 4.7515

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019192910.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.7	1.3e-33	188	242	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe Fveav++LGG ekAtPk +l+lmkv+gLt++hvkSHLQkYR+ XP_019192910.1 188 KPRMRWTPELHEVFVEAVNKLGGMEKATPKGVLNLMKVEGLTIYHVKSHLQKYRT 242 79****************************************************8 PP
2	Myb_DNA-binding	53.1	7.6e-17	190	241	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m +g+t +++ks++qky+ XP_019192910.1 190 RMRWTPELHEVFVEAVNKLGGMekaTPKGVLNLMKvEGLTIYHVKSHLQKYR 241 89****************88***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MNMHPAVFLQ ISSEAEHSKI GVSGAISTSL PILPLIEERY PKLPDALHSR SENKETTNSF 60 SSMTIPSASN NVGSWGNDAY QEFLEYKPNI SVQNGQVETL AGVMSSDEYA KRKDWQEWAD 120 QLINDDDTLD PNWSDILVDV NFPDPEPKML PGPTDVPVSQ PQLNHLTPTS SGQNCPSAGP 180 LSTATLTKPR MRWTPELHEV FVEAVNKLGG MEKATPKGVL NLMKVEGLTI YHVKSHLQKY 240 RTARYKPEPT EGSSEKKPVT IPDLASFDLK PGMGITEALR LQMEVQKQLH EQLETQRKLQ 300 LQIEEQGKYL QMMYEKTREM EKELKASSSS KPDEHPLSPP PSDNQEPLNL DNTNAELSAN 360 DANSSGVLLT QNQSSETSSQ ENIACEPPMK RARANETAVC

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MNMHPAVFLQ ISSEAEHSKI GVSGAISTSL PILPLIEERY PKLPDALHSR SENKETTNSF  60
SSMTIPSASN NVGSWGNDAY QEFLEYKPNI SVQNGQVETL AGVMSSDEYA KRKDWQEWAD  120
QLINDDDTLD PNWSDILVDV NFPDPEPKML PGPTDVPVSQ PQLNHLTPTS SGQNCPSAGP  180
LSTATLTKPR MRWTPELHEV FVEAVNKLGG MEKATPKGVL NLMKVEGLTI YHVKSHLQKY  240
RTARYKPEPT EGSSEKKPVT IPDLASFDLK PGMGITEALR LQMEVQKQLH EQLETQRKLQ  300
LQIEEQGKYL QMMYEKTREM EKELKASSSS KPDEHPLSPP PSDNQEPLNL DNTNAELSAN  360
DANSSGVLLT QNQSSETSSQ ENIACEPPMK RARANETAVC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	3e-84	G2-like family protein