PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019192310.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 309aa    MW: 34875.6 Da    PI: 7.5012
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019192310.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.29.2e-1122951797
                    E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                     lp    ++  +   ++++ ++ +++  sWev+      +g+ ++tkGW  F+ +++++  D ++F+++g s+f  +v+v+
  XP_019192310.1 22 ELPPIISKKLVE---QEVEQVMLTSQKGSWEVQT--HTFGGELYFTKGWDAFALQHDICYADLLLFEHTGGSSF--KVRVL 95
                    555554444432...3455566777888******..999999**************************999999..66555 PP
2B334.34.1e-112202921588
                     -EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3  15 rlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrs 88 
                      + +p +f+ ++g+   ++  + l+   s ++ ++k+  ++++++  +++++GW+eF   n+Lk+g++++Fkl +++
  XP_019192310.1 220 YMHIPANFCLANGLY--CNARICLKGpCSEQEVSLKV--CRGGRTiyTIISRGWSEFIAGNDLKVGEICTFKLRSTE 292
                     589*********998..7889*****44558888888..77777777999**********************87643 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MGEKLPLFFR FMAIHGSPTR LELPPIISKK LVEQEVEQVM LTSQKGSWEV QTHTFGGELY  60
FTKGWDAFAL QHDICYADLL LFEHTGGSSF KVRVLGATCC EKDFQGGRAQ GKNAEDSVKL  120
EVDIDEVPHD HAHDKVTKRG RTQGKNAEDS EDSVEFEVDL DEVEVDMDEV PSPVKIQKHD  180
HAKKVTRRKR NPKVVNMSST DRSQFVRSIK QYNIRRRSPY MHIPANFCLA NGLYCNARIC  240
LKGPCSEQEV SLKVCRGGRT IYTIISRGWS EFIAGNDLKV GEICTFKLRS TEGSSNGVVF  300
DVDVLRKST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.15e-09B3 family protein