PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019191854.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 201aa MW: 22920.6 Da PI: 8.4802 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.4 | 4.6e-15 | 6 | 53 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+ +++ +G +W+ ++ g+ Rt+k+c++rw +yl XP_019191854.1 6 RGAWSPEEDRKLISYIRNHGIWNWTQMPKFAGLSRTGKSCRLRWVNYL 53 89******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 39.1 | 1.8e-12 | 59 | 104 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE e++++ + +G++ W++ a+ ++ gR+++++k++++++l XP_019191854.1 59 RGPFSREEVEIIIKMYESMGNR-WSAMAAQLP-GRSDNEIKNFFHTHL 104 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MAEVKRGAWS PEEDRKLISY IRNHGIWNWT QMPKFAGLSR TGKSCRLRWV NYLRPDVKRG 60 PFSREEVEII IKMYESMGNR WSAMAAQLPG RSDNEIKNFF HTHLKKHLRR QPKHAAAAAD 120 RRSKDDNTTS DDAKIIIADH CNSSSVVILE SSRSCSSRVE NNDAPSGGNN GTAPAFSSDT 180 HDDDVNAFWY DVLMEAEYLN F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 8e-51 | MYB family protein |