PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191673.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 259aa    MW: 29604.9 Da    PI: 6.7745
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY62.76.6e-20106164259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg +WrKYGqK++ +s++pr Y+rCt++   gC+++k+v+r +ed+   +++Y g+H+++
  XP_019191673.1 106 EDGGAWRKYGQKQILNSKYPRCYFRCTHKhsqGCKATKQVQRISEDE--YKTMYFGHHTCK 164
                     7999************************98999***********665..789*******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MAKPTMENPL HTHRKRVISV LHKGKKSATQ LQTLLRNFSL GSQEESRRLF PELTEQIMGS  60
FSEAVSQLLQ AADSAVSGEN PAKARRGCYN RRKCSDTWIN VSNTKEDGGA WRKYGQKQIL  120
NSKYPRCYFR CTHKHSQGCK ATKQVQRISE DEYKTMYFGH HTCKDSFRAP VLAIESISND  180
PFPMTTADST YSPSFECITQ EGSGGGDHSY NDGIVNQEDH QEFKDEYCMT SDNFDEDESC  240
FANLDNLFQS EEMRRLLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-30WRKY family protein