PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019191527.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

HSF

Protein Properties

Length: 355aa MW: 38899.5 Da PI: 4.9567

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019191527.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.8	2.3e-35	10	101	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 F++k+y++++d++l+ li w +++nsfvv+d+ +f++k+Lp +Fkhsnf+SFvRQLn+YgF+kv+ ++ weF++++F +g+++ll++ XP_019191527.1 10 FVMKTYQMVNDPKLDGLIAWGRDNNSFVVVDPLDFSQKILPAFFKHSNFSSFVRQLNTYGFRKVDPDK---------WEFANEWFLRGQTHLLKN 95 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i rkk+ XP_019191527.1 96 IVRKKH 101 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MEDNNIIAPF VMKTYQMVND PKLDGLIAWG RDNNSFVVVD PLDFSQKILP AFFKHSNFSS 60 FVRQLNTYGF RKVDPDKWEF ANEWFLRGQT HLLKNIVRKK HGRVSSSAAL LQHKHEDGED 120 DDDEEIVAEI ERLKEEQKAL ELELQSMNRR LEATERRPQQ MMTFLGKFVD DPEILTRMML 180 EKERAIRLSL SSGEKRRKLA MSESSSVKSE EVEEESGGGG GGGGCTMIRG GAISSISSPD 240 ANFDVDTFCQ SSPETPSPAA VWLSGRQVLG GLPMINHFGP YGGKNNCATI STTSSLSSGS 300 SESCSYTVAT PLEGFPNYDH RGTGDSSCYG GGGSLSGEAA SPPPPYPFSL LGGGF

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MEDNNIIAPF VMKTYQMVND PKLDGLIAWG RDNNSFVVVD PLDFSQKILP AFFKHSNFSS  60
FVRQLNTYGF RKVDPDKWEF ANEWFLRGQT HLLKNIVRKK HGRVSSSAAL LQHKHEDGED  120
DDDEEIVAEI ERLKEEQKAL ELELQSMNRR LEATERRPQQ MMTFLGKFVD DPEILTRMML  180
EKERAIRLSL SSGEKRRKLA MSESSSVKSE EVEEESGGGG GGGGCTMIRG GAISSISSPD  240
ANFDVDTFCQ SSPETPSPAA VWLSGRQVLG GLPMINHFGP YGGKNNCATI STTSSLSSGS  300
SESCSYTVAT PLEGFPNYDH RGTGDSSCYG GGGSLSGEAA SPPPPYPFSL LGGGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24520.1	1e-75	HSF family protein