PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191470.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 432aa    MW: 48535 Da    PI: 9.0941
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191470.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.00016373392323
                     ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                     C+ Cgk+F +++ L+ H++++
  XP_019191470.1 373 CSQCGKPF-NPEKLHAHMKSC 392
                     ********.**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MLFPMEEIAF AHHKRLPIKR RFMEPHHHHH PPSVAAAAAA AEVRKLHIVY FLSRNGRIEH  60
PHLIRVHHLS RHGVRLRDVK RWMGELRGKE LPESYAWSYK RKYKTGYVWQ DLVDDDLLTP  120
ISDNEYVLKG SEISSSTPTK EHCYREKVVP MQKDSLLEEE EEEAAKGSKP SAKEETDQSH  180
HQSPSDESRK TSSEIEEEES PVFGSETSTM TDDSPAAKLE EDQEMHDGRR SVDDADQKSS  240
SLRSLFAKKK RGGGEDGDEE KNGTPRSTTS NSTFGKSRSS SGGGGGSSSI FRNLISCGTV  300
DTNDSAVLPM QRRRPAAASS AEICKPEKLG GSQRIYRTNW NQEQQSKPRK SCDGVYNGGR  360
RSFSGTYYKS PNCSQCGKPF NPEKLHAHMK SCKGMKMWAK TTHPVSSAPE KDSERSVEKS  420
TKNSVSARFL TR