PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191363.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 301aa    MW: 32429.4 Da    PI: 5.1915
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191363.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.5e-10150194554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L+el+P++      K + a++L +  +Y+k L
  XP_019191363.1 150 HSIAERLRRERISERIKALQELVPSC-----NKTDRAAMLDEILDYVKFL 194
                     99***********************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MANNPPEGYA GGDDFLEQIL AIPSYAGLSV TDVGGASSDT ASTISQLSSA AGGLQQQLFP  60
LGLSLDNGRD DVSDTGGFAV KPEREAVNLG NLYSGLEHLQ PHTVRHTVPA VHQVQPFQGQ  120
PTPSTAVTVP HPPAIRPRVR ARRGQATDPH SIAERLRRER ISERIKALQE LVPSCNKTDR  180
AAMLDEILDY VKFLRLQVKV LSMSRLGGAS AVAQLVADIP LESVEGESGE NRANQHVWEK  240
WSNAETEREV AKLMEEDVGA AMQYLQSKSL CIMPISLAAL IYPTHQSDDS SAIKPEPSAP  300
S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155160RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.31e-63bHLH family protein