PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019191360.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | HB-other | ||||||||
Protein Properties | Length: 110aa MW: 12277.7 Da PI: 6.7948 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 19.5 | 1.6e-06 | 71 | 109 | 3 | 41 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-H CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLte 41 k+++++++q++ Le+ Fe ++ + e+ +LAk lgL+ XP_019191360.1 71 KKRRLSPDQVHFLEQSFEVENMLEPERNVKLAKDLGLQP 109 56689********************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 110 aa Download sequence |
MLLATSPVNS TVHRLRVCRR LPAPPPHSLT DERYSSSSAS ASSMVNFNDG GEMERGGNED 60 YGGGGFYQAE KKRRLSPDQV HFLEQSFEVE NMLEPERNVK LAKDLGLQPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 3e-14 | HD-ZIP family protein |