PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019191303.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NF-YB | ||||||||
Protein Properties | Length: 166aa MW: 18041.2 Da PI: 6.7783 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 186.2 | 2.5e-58 | 28 | 125 | 1 | 98 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrflPian+srimkk+lPa +ki+kdaketvqecvsefisfvtseasdkcq+ekrkt+ngddllwa+atlGfedy++plkvyl++yre+eg XP_019191303.1 28 VREQDRFLPIANISRIMKKALPASGKIAKDAKETVQECVSEFISFVTSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYIDPLKVYLTRYREMEG 122 69********************************************************************************************* PP NF-YB 96 ekk 98 ++k XP_019191303.1 123 DTK 125 975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MADGQHPASP GGGSHDSGDH SPGPRSNVRE QDRFLPIANI SRIMKKALPA SGKIAKDAKE 60 TVQECVSEFI SFVTSEASDK CQKEKRKTVN GDDLLWAMAT LGFEDYIDPL KVYLTRYREM 120 EGDTKGSAKA SDGSSRDAVP NPNSQGFSKY LTLFAPEGIS KCIQVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53340.1 | 2e-71 | NF-YB family protein |