PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191164.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 336aa    MW: 37145.2 Da    PI: 4.8202
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191164.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.84.6e-28126187159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDg++WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs+ d +v+e+tY+g+H ++
  XP_019191164.1 126 LDDGHSWRKYGQKDILGAHHPRAYYRCTHRntqGCLATKQVQRSDADASVFEVTYKGRHSCK 187
                     59***************************98889*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MEKGGVLEGS SVIINELTQG RELAAQLKGQ LLDSFTSPEI CEPLLEKILS SYENALTLLN  60
FKLCFGDPNA LDSPLPLLGN NSTGEASDGD SSKDQCHRDV FKKRKTSAQW SKQVRICSAT  120
ALGGNLDDGH SWRKYGQKDI LGAHHPRAYY RCTHRNTQGC LATKQVQRSD ADASVFEVTY  180
KGRHSCKASH PPMISGENET PKPQSQLQQQ AHSSLVLDYG LNQKLETSEK DVDVLPPFSF  240
PPAIKCEVAD KENNSLKSPF TPPSTSDEEC MYLSFLHGQN DDDDFGLSQI LDRSESDLTD  300
HIISTPTSVT NSPFQDWDFL PDQPNLDATD IAKYFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.13e-43WRKY family protein