PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019191124.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GRAS | ||||||||
Protein Properties | Length: 538aa MW: 59707.5 Da PI: 5.6247 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 422.8 | 2.9e-129 | 168 | 538 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 +elL++cAeavs+ d + a+ l++ l++++s +gdpmqRl ay++e+L+ar++ s+s +yk+l+++e s sse l++++++++++P++kf+++ XP_019191124.1 168 KELLFACAEAVSDADISTAEVLMNVLEKRVSVSGDPMQRLSAYMLEGLRARILASGSIIYKKLKCKEPS---SSELLSYMQVLYNICPYFKFAYM 259 589*****************************************************************9...9********************** PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 N I ea+ +e+r+Hi+Df++ qG QW+ L+++La+Rp+gpp +lRiTgv++++s + l+ +gerLakfA+e+gvpfef+ + + ++ XP_019191124.1 260 SSNVVIKEAMMNENRIHIVDFQVAQGSQWMFLIKSLADRPGGPPlMLRITGVDDSQSAhaRGGGLQLVGERLAKFAKECGVPFEFHS-AGISGSE 353 ****************************************999999********9988889999***********************.7889*** PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 +ele+L v+pgEalaVn+ ++lh+++desvs+ ++rd++L+lvkslsPk+v+v+eqe+++n+++Fl rf e+l+yy+a+f+s++a pr++++ri XP_019191124.1 354 VELENLWVQPGEALAVNFPYMLHHMPDESVSTMNHRDRLLRLVKSLSPKIVTVIEQESNTNTTPFLPRFRETLDYYTAMFESIDAARPRDDRQRI 448 *********************************************************************************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 + E+++++r+ivn++acega+r+erhe ++kW++r+++aGF+p pls ++ + ++++l++++ + + + + +g+l+lgWk+r+L s SaWr XP_019191124.1 449 SAEEHCVARDIVNIIACEGADRVERHEPFGKWSMRFTMAGFTPCPLSPSVGEAMRHMLQEYSPN-FGIAQGHGALYLGWKNRALASSSAWR 538 **************************************************************55.*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 538 aa Download sequence |
MQASQGPQSS SSSVQRFYHQ PQQYYAAFHV LNNDVSNESG SVGEQGFFQA QNEQFFTLDS 60 APAGIDSVYY DSPPAASVSS NRSAFSPQCS QSYMSDNTTC GSPLSGCSGV VDGNELRHVL 120 RELENKLLGP ESEIDDNYSC SFSDAVPKSS SVMKWKRMLE IAPSLDTKEL LFACAEAVSD 180 ADISTAEVLM NVLEKRVSVS GDPMQRLSAY MLEGLRARIL ASGSIIYKKL KCKEPSSSEL 240 LSYMQVLYNI CPYFKFAYMS SNVVIKEAMM NENRIHIVDF QVAQGSQWMF LIKSLADRPG 300 GPPLMLRITG VDDSQSAHAR GGGLQLVGER LAKFAKECGV PFEFHSAGIS GSEVELENLW 360 VQPGEALAVN FPYMLHHMPD ESVSTMNHRD RLLRLVKSLS PKIVTVIEQE SNTNTTPFLP 420 RFRETLDYYT AMFESIDAAR PRDDRQRISA EEHCVARDIV NIIACEGADR VERHEPFGKW 480 SMRFTMAGFT PCPLSPSVGE AMRHMLQEYS PNFGIAQGHG ALYLGWKNRA LASSSAWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17230.1 | 0.0 | GRAS family protein |