PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019190897.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 406aa MW: 43077.2 Da PI: 6.9742

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019190897.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	66.5	4.7e-21	302	364	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e+kr+rrkq+NRe+ArrsR+RK+ae+eeL++++++L++eN +L+ e+++++ e+++l +++ XP_019190897.1 302 EREVKRQRRKQSNRESARRSRLRKQAECEELAQRAEALKEENASLRAEVSRIRSEYDQLLAQN 364 799********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MGSSEVSKSS KEAKEAKEPK TPNSQEQASP STTGTVNPDW SGFQAYSPMP PPGFLASSPQ 60 PHPYMWGVQQ FMPPYGTPPH PYIAMYPPGG IYAHPSIPPG SYPFSPFAVP SSNGVADASA 120 NTHSTVEVDG KAEGKEKLPI KRSKGSLGSL NMLTRKNNEP GKTSGAFANG GYSKSAESAS 180 EGSSEGSDAN SQNESQMKSG GRQDSAETSQ NGTAHSSQNG GTNAHELINH SVAIVPFSAA 240 GAAVGVPGPT TNLNIGMDYW GTTASSPIPS IRGKVPSASV AGGMVTAGSR ESVQSQLWPQ 300 DEREVKRQRR KQSNRESARR SRLRKQAECE ELAQRAEALK EENASLRAEV SRIRSEYDQL 360 LAQNASLKER LGESSGNEDP RLSKNEQLLS NDAPHPSEAV PMEGNQ

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MGSSEVSKSS KEAKEAKEPK TPNSQEQASP STTGTVNPDW SGFQAYSPMP PPGFLASSPQ  60
PHPYMWGVQQ FMPPYGTPPH PYIAMYPPGG IYAHPSIPPG SYPFSPFAVP SSNGVADASA  120
NTHSTVEVDG KAEGKEKLPI KRSKGSLGSL NMLTRKNNEP GKTSGAFANG GYSKSAESAS  180
EGSSEGSDAN SQNESQMKSG GRQDSAETSQ NGTAHSSQNG GTNAHELINH SVAIVPFSAA  240
GAAVGVPGPT TNLNIGMDYW GTTASSPIPS IRGKVPSASV AGGMVTAGSR ESVQSQLWPQ  300
DEREVKRQRR KQSNRESARR SRLRKQAECE ELAQRAEALK EENASLRAEV SRIRSEYDQL  360
LAQNASLKER LGESSGNEDP RLSKNEQLLS NDAPHPSEAV PMEGNQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	319	325	RRSRLRK
2	319	326	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-128	bZIP family protein