PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019190597.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | FAR1 | ||||||||
Protein Properties | Length: 824aa MW: 92962.4 Da PI: 8.3388 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 47.5 | 5.7e-15 | 127 | 224 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 fY +YA+++GFsv + k+ r+g+ t+r + Cs+eg + ++ + ++rr+r+++r++C+a++ + k+k + v+ ++ eH+ XP_019190597.1 127 FYINYARTCGFSVPHGTLKRG-RDGQLTSRYLLCSREGVKGGGQNPpkpvvggsggSITQRRKRVSNRVNCNARICIIKDKGVGFIVSIFVPEHT 220 9***************99998.8888**************99988899*******99999*********************************** PP FAR1 87 Hela 90 H ++ XP_019190597.1 221 HRMC 224 **98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 824 aa Download sequence |
MHSIRNGSSN IEDVINEKDT KKCSLGTQKV QEEEDFNILT YFVSQLCDPS LKPSSSDVGV 60 ILISCDSGNT PHVLPEIICS LNVGGQESAG TGGYTSIPVK YWWPAVDSAI TPAIGYRFKT 120 LAEGVYFYIN YARTCGFSVP HGTLKRGRDG QLTSRYLLCS REGVKGGGQN PPKPVVGGSG 180 GSITQRRKRV SNRVNCNARI CIIKDKGVGF IVSIFVPEHT HRMCSEPSKL FMRINRKLDV 240 AQQAFLTNCV KANVGGSKGF RLYKESVGSY ANVGATDTEF HNFKRDLQSY IHDKDGEMII 300 AKFKQRCDIC ENFFFDHYLD EENHLARVFW ADHTRRQSFM SFGDVISFDA TYGTNRYSLV 360 FVPFTGVDHH KRCITFACGL LTREDTESYV WVLERFKAAM GKSPLCVVTD QDPAMKSAIA 420 QILPECRHRY CMWHIMTKVS EKSGVELSKD QTFRTQLNNI VWNETIGISD FETQWQSLME 480 KYNLTGRRWF IKLYTERAFW IPSYFLDLPM SGVLRTTSHS ESENNAYGKS TRPHCSLVEF 540 YVQYESVLET QRHKQCKLNA ESEGSLPEFK TPLALERHIA QVFTLTVFYE LQLEIEAACF 600 YCKVVGIRAD GECIRYDIKG EYNVIHTVEY MPSLTIASCS CKLFERLGLV CRHMFLVFKD 660 AEMASLPARY IAARWCKQEG LANWCAQCSY CPPLESGPNR LWTEIHRCTA MVGSNTVRQT 720 RMLQVIEELR DEFLSDGMSV NPPKGKGVAI AALCGVEPPT SITIKPPAQA KNKGTGKRIK 780 SQRELAIERS GKACRKCGVC GEYAHHNARS CPLKRSVHPD GPLY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 5e-86 | FAR1 family protein |