PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019190382.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 307aa MW: 34783.8 Da PI: 6.7003 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.3 | 8.8e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l d+++++G g+W++ ++ g++R++k+c++rw +yl XP_019190382.1 14 KGPWTPEEDKKLSDYIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.8 | 1.8e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eE+ +++++ lG++ W+tIa +++ gRt++++k++w+++l XP_019190382.1 67 RGKISQEEEHTILHLHSILGNK-WSTIATHLP-GRTDNEIKNFWNTHL 112 7999******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MGRAPCCDEN GLKKGPWTPE EDKKLSDYIE KHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKI SQEEEHTILH LHSILGNKWS TIATHLPGRT DNEIKNFWNT HLKKKLIQMG 120 YDPMTHRPRT DDLFSNLPNL LALATLLQPH KLEEAQAAAH NIMATKIQYL QMLFQSSPPL 180 PMTTTTSSSS YDNNGDFWDF NLPNLSNKET DNNQTLFSIE NSGTSQLLHN QLVPFNFQTH 240 LNNDNNNKSL NSDSILPPLT DCFLNNNNNK GDSTSTSSNG DYQGTSSSSS YDWPELLLEE 300 AFMHDIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 3e-87 | MYB family protein |