PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019190147.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 347aa    MW: 38032 Da    PI: 6.8011
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019190147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.55.8e-33192249259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s++prsYYrCts++Cpvkk+vers +dp+vv++tYeg+H+h+
  XP_019190147.1 192 EDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCPVKKRVERSYQDPSVVVTTYEGQHDHH 249
                     8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MAEELGGDFY YHQPFQDDRH GGFLYSTAQA SSMADSSSFL HHHNHNQISL LDPSSPYISF  60
TDFLQGSSDF EASAGVGFSS SPPPFSSAKD GERRPVNVTT MMTDAGGGGS SETPVAMTPN  120
SSISSSSTEA GGGDNDDSKH KREKVAKETE GEDDGDDNNS SKKENKGKKK GEKKQRQPRF  180
AFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTSQ KCPVKKRVER SYQDPSVVVT  240
TYEGQHDHHI PTNLRGSLAG MFPPSMLPTS SLLGGPPPPH GGSGGALPPE LIMAQINNPL  300
HHHLYGGAAA SMMFQPHQNN LTQMHQIHPD FGLLQDMVPS MIFKQEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.11e-50WRKY family protein