PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019189796.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YB
Protein Properties Length: 155aa    MW: 17446.9 Da    PI: 4.5157
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019189796.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB69.94.6e-221194386
           NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvy 86
                    ++d+ lP a +++i+k++lP + ++++d+++++ ec +efi +++se+++ c++ +++ti+++ +l al  lGf +y+e++ + 
  XP_019189796.1 11 KEDASLPKATMTKIIKEMLPPDVRVARDCQDLLIECCVEFINLISSESNEVCNKVEKRTIAPEHVLKALEVLGFGNYIEEVYAA 94
                    6899***************************************************************************98654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MEPMDIVGRA KEDASLPKAT MTKIIKEMLP PDVRVARDCQ DLLIECCVEF INLISSESNE  60
VCNKVEKRTI APEHVLKALE VLGFGNYIEE VYAAYEQHKL ETMDSVRGGK WSNVVEMTED  120
EALAAQQRMF AEARARMNNG ITVPKQSEPE QNTNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.42e-90NF-YB family protein