PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019189759.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 481aa MW: 52954.6 Da PI: 7.2049 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 54.1 | 2.7e-17 | 239 | 288 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lr ++P++ ++K +Ka+ L +++eYIk Lq XP_019189759.1 239 RSKHSATEQRRRSKINDRFQMLRGIIPHS----DQKRDKASFLLEVIEYIKFLQ 288 889*************************9....9*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 481 aa Download sequence |
MELPQPRAFG TEGGKTTHDF LSLYSSLEQD SRPPQGGFLR THDFLQPLEG AGKSVGKEEI 60 DDEVEMRDVE KPLPPAHPAV EHVLPGGIGT YSISYLHQRS PKPNDENSDY SSCTRNESTL 120 KKGMAKKDNF AGDFRAVLRE TGMNKGGGSQ LGQPSQTPSN LKNKTATFSS FLASQQFSEQ 180 NNQSFLDMIA SSKSVREDDG DLEEEEEFVI KKEQSLHPKG NLSAKVDEKS SDQKPNTPRS 240 KHSATEQRRR SKINDRFQML RGIIPHSDQK RDKASFLLEV IEYIKFLQEK VHKYEGSYQG 300 CRDNETSKLP WSKCQIENNE KPVSLPMLPN AFPFCGTSNI VAQHSPKLAL GRDASTTSRH 360 QSQCSSDRSH ITSQAVASDK SKDEDLTVES GTISISSMYS QGLLNTLTKA LENSGVDLSQ 420 ASISVHVDLG KRSNGRLNNS SASTLKGDDV STSNQPMPHS ITSTSQGECG QAQKRLKTSR 480 G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08130.2 | 3e-75 | bHLH family protein |