PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019189680.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NF-YB | ||||||||
Protein Properties | Length: 140aa MW: 15718.5 Da PI: 5.8354 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 153.1 | 5.1e-48 | 22 | 111 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 reqdrflPianvsrimkkvlPan+ ketvqecvsefisf+t+eas kcqrekrktingddllwa++tlGfe+yveplkvyl++ r++ege XP_019189680.1 22 REQDRFLPIANVSRIMKKVLPANT------KETVQECVSEFISFITGEASYKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRSRDMEGE 110 89*******************985......7***************************************************************9 PP NF-YB 97 k 97 k XP_019189680.1 111 K 111 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
MADSDNESGG HRDGHDGDSS QREQDRFLPI ANVSRIMKKV LPANTKETVQ ECVSEFISFI 60 TGEASYKCQR EKRKTINGDD LLWAMTTLGF EEYVEPLKVY LQRSRDMEGE KSAMAGRQEK 120 DGGGNGRRRT DVKGPCCPQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 2e-60 | NF-YB family protein |