PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019189643.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 274aa MW: 30940.9 Da PI: 7.2043 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.4 | 6.7e-18 | 26 | 73 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd ll+++++ +G g+W++ a+ g++Rt+k+c++rw++yl XP_019189643.1 26 RGPWTPEEDTLLIHYIACHGEGRWNLLAKSSGLRRTGKSCRLRWLNYL 73 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49 | 1.4e-15 | 79 | 122 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ +++E++l+++++ ++G++ W++Ia+ ++ gRt++++k++w++ XP_019189643.1 79 RGNLSPQEQLLILELHSKWGNR-WSKIAQFLP-GRTDNEIKNYWRT 122 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MASSPSKSST SSCLTAEDMD STELRRGPWT PEEDTLLIHY IACHGEGRWN LLAKSSGLRR 60 TGKSCRLRWL NYLKPDVKRG NLSPQEQLLI LELHSKWGNR WSKIAQFLPG RTDNEIKNYW 120 RTRVQKQARH LKIDSNSAAF QQLIRGFWMP RLIQKIQASS IQHSDEILNT QSQQVPAPVP 180 PDCHQTTINS GLEFSECPKT ALSNDPKFEP CPNGNHQYYA SHVMDGFSPS PIFPETGEFK 240 DVIDYDLLGT GGGGGNSLIM DGFLDDSLWT MDKF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25340.1 | 1e-78 | MYB family protein |