PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019188786.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | FAR1 | ||||||||
Protein Properties | Length: 214aa MW: 23676 Da PI: 8.6539 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 62.2 | 1.5e-19 | 64 | 150 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 YneYA++vGFsvrk +++++ +++i +++f C+k g++++ ++ + ++ r+g a ++ dg+w vtk ++ HnHel+ XP_019188786.1 64 LYNEYAYRVGFSVRKGQQRYKASTKTIQMKRFFCYKAGFKAKANSG--VNLYSKIDIRMGFGAFVQFDVGGDGRWTVTKHVKVHNHELC 150 7****************************************99887..8888999*********************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MEEATNPGDL IGDGLSTIPV NEDLVGDSLI GDQSDVNIDG SSSIPAVEDL VGVVVSNGDE 60 AFDLYNEYAY RVGFSVRKGQ QRYKASTKTI QMKRFFCYKA GFKAKANSGV NLYSKIDIRM 120 GFGAFVQFDV GGDGRWTVTK HVKVHNHELC ALDKSHLFRS HRRVRNNQIS YLKDLKKSGV 180 AVADGMRLLK HQSGGLHLLG SPIEMLTIHW LMIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 8e-14 | FAR1 family protein |