PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019188760.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 203aa    MW: 22436.5 Da    PI: 9.9797
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019188760.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.41.3e-1679130256
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 
                     +ykGVr+++ +g+++AeIrdp   + k +r +lg++  +e+Aa a+++ + kl+g+
  XP_019188760.1  79 RYKGVRRRP-WGKFAAEIRDP---NrKGARLWLGTYERPEDAALAYDREAFKLRGA 130
                     7********.**********9...6566*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MESEFDLAFL DSLQQQLLDD SDFPEIFAAI DRCGNSSAVI GGAGGSPESW EGDGEVQKAA  60
IGAAREECSP PLPRDYWRRY KGVRRRPWGK FAAEIRDPNR KGARLWLGTY ERPEDAALAY  120
DREAFKLRGA RALLNFPHLI GSNVPAPIRV KPRRRSLPKA ALSSPLSTES GIGTPKRRKI  180
SIINSVAAKV NLDRVSMLDM LTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.16e-39ERF family protein