PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019188084.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 378aa MW: 38992 Da PI: 9.4894

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019188084.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.4	7.7e-39	63	121	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s XP_019188084.1 63 ETALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRS 121 6789*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MVFSSIPAYL DPANWQQQLN HQVGTSIQTT QLPSAQPPHG SAGTIRPGSM ADRARLANMP 60 IPETALKCPR CESTNTKFCY FNNYSLTQPR HFCKTCRRYW TRGGALRNVP VGGGCRRNKR 120 SGKGGSSSGG GGSASKSPSN SSERQAGSSS CSGVSTSSIN ISGNSAAGLL GGAGLSPQIP 180 PMRFMSPLGQ LSEHYTAGND NIGLNINYTG LSAMAGRDNF PFQFGNNNNN NNNSNNNNNL 240 LGLGGGGGGG PGGGGGLASL LSGGIEQWRL QTPILGGLDL SPSPGLYQFP GGPEAAPSGF 300 LGGEASETRP KFTSSSMLTT QMASVKMEDH NNQESSMARQ LLGFQPGNDQ WGGGGGGAAA 360 AWSDVSASFT SSSTSNRL

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MVFSSIPAYL DPANWQQQLN HQVGTSIQTT QLPSAQPPHG SAGTIRPGSM ADRARLANMP  60
IPETALKCPR CESTNTKFCY FNNYSLTQPR HFCKTCRRYW TRGGALRNVP VGGGCRRNKR  120
SGKGGSSSGG GGSASKSPSN SSERQAGSSS CSGVSTSSIN ISGNSAAGLL GGAGLSPQIP  180
PMRFMSPLGQ LSEHYTAGND NIGLNINYTG LSAMAGRDNF PFQFGNNNNN NNNSNNNNNL  240
LGLGGGGGGG PGGGGGLASL LSGGIEQWRL QTPILGGLDL SPSPGLYQFP GGPEAAPSGF  300
LGGEASETRP KFTSSSMLTT QMASVKMEDH NNQESSMARQ LLGFQPGNDQ WGGGGGGAAA  360
AWSDVSASFT SSSTSNRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	2e-43	Dof family protein