PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019188083.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 379aa MW: 39089.1 Da PI: 9.4894

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019188083.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.4	7.7e-39	64	122	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s XP_019188083.1 64 ETALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRS 122 6789*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MVFSSIPAYL DPANWQQQLN HQVGTSIQTT QLPSAQPPPH GSAGTIRPGS MADRARLANM 60 PIPETALKCP RCESTNTKFC YFNNYSLTQP RHFCKTCRRY WTRGGALRNV PVGGGCRRNK 120 RSGKGGSSSG GGGSASKSPS NSSERQAGSS SCSGVSTSSI NISGNSAAGL LGGAGLSPQI 180 PPMRFMSPLG QLSEHYTAGN DNIGLNINYT GLSAMAGRDN FPFQFGNNNN NNNNSNNNNN 240 LLGLGGGGGG GPGGGGGLAS LLSGGIEQWR LQTPILGGLD LSPSPGLYQF PGGPEAAPSG 300 FLGGEASETR PKFTSSSMLT TQMASVKMED HNNQESSMAR QLLGFQPGND QWGGGGGGAA 360 AAWSDVSASF TSSSTSNRL

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MVFSSIPAYL DPANWQQQLN HQVGTSIQTT QLPSAQPPPH GSAGTIRPGS MADRARLANM  60
PIPETALKCP RCESTNTKFC YFNNYSLTQP RHFCKTCRRY WTRGGALRNV PVGGGCRRNK  120
RSGKGGSSSG GGGSASKSPS NSSERQAGSS SCSGVSTSSI NISGNSAAGL LGGAGLSPQI  180
PPMRFMSPLG QLSEHYTAGN DNIGLNINYT GLSAMAGRDN FPFQFGNNNN NNNNSNNNNN  240
LLGLGGGGGG GPGGGGGLAS LLSGGIEQWR LQTPILGGLD LSPSPGLYQF PGGPEAAPSG  300
FLGGEASETR PKFTSSSMLT TQMASVKMED HNNQESSMAR QLLGFQPGND QWGGGGGGAA  360
AAWSDVSASF TSSSTSNRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	2e-43	Dof family protein